Exercise for training course: Error in function / posting reprex

Hello!
Am trying to remove the “” from the result column and replace with NA and the is.na function not producing the desired output - am I using the wrong one here?

  • please note - just posting for practice, this was a previous error that I have now resolved.
# load packages
pacman::p_load(rio, here, skimr, lubridate, janitor, datapasta, epikit, flextable, reprex, tidyverse)

# data
error_data <- data.frame(
  stringsAsFactors = FALSE,
           case_id = c(1L, 2L, 4L, 5L, 6L),
                 date_of_result = c("2013-03-04","2013-03-10",NA,"2013-05-15",
                                    "2013-04-26"),
            result = c("Death", "Death", "", "Recovered", "Death")
             )

# change "" to NA
error_data <- error_data %>% 
  mutate(result, is.na(result, ""))
#> Error in `mutate()`:
#> ℹ In argument: `is.na(result, "")`.
#> Caused by error in `is.na()`:
#> ! 2 arguments passed to 'is.na' which requires 1

Created on 2024-03-04 with reprex v2.1.0

Session info

1 Like

Hello,

You will need to assign result a new value with an equals sign in the mutate() function, below I used the if_else() function to convert result to NA as you require:

# loading packages
library(tidyverse)

# creating fake data
error_data <- data.frame(
    stringsAsFactors = FALSE,
    case_id = c(1L, 2L, 4L, 5L, 6L),
    date_of_result = c("2013-03-04", "2013-03-10", NA_character_, "2013-05-15",
                                         "2013-04-26"),
    result = c("Death", "Death", "", "Recovered", "Death")
)

# cleaning the data
clean_error_data <- error_data |>
    mutate(result = if_else(result == "", NA_character_, result))

Created on 2024-03-04 with reprex v2.1.0

Session info
sessioninfo::session_info()
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All the best,

Tim